NYU Dataset

Lymphatic Vessel Transit Seeds Precursors to Cytotoxic Resident Memory T Cells in Skin Draining Lymph Nodes

Part of: Lund Lab |
UID: 10653
* Corresponding Author
Description

Resident memory T cells (TRM) provide localized protection in peripheral tissues to pathogens and cancer. However, how they develop during primary infection and their functional significance still remains unclear. This study observed the anatomical distribution of anti-viral CD8+ T cells as they simultaneously seed skin and lymph nodes (LN) TRM. They used a model of skin infection with restricted antigen distribution. The dataset contains single cell RNA sequencing data. These data reveal that contraction of peripheral tissue anti-viral responses coincides with seeding of TRM in the LN.

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Associated Publications
Data Type
Equipment Used
10× Genomics Chromium
BD FACSAria II
BD FACSymphony
Illumina NovaSeq 6000
Keyence BZ-X810
Leica Cryostat
Zeiss Axio Observer 7
Software Used
FlowJo
GraphPad Prism v9.0
SCENIC
Seurat
Grant Support
Lloyd J. Old STAR Program/Cancer Research Institute
RSG-18-169-01-LIB/American Cancer Society
AACR-BMS Midcareer Female Investigator Grant/American Association for Cancer Research