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  • NYU Dataset

    Eight bilateral silicon-probe multi-cellular electrophysiological recordings on four male Long-Evans rats

    Alternate Title(s)
    HC-11
    Authors
    Andres D. Grosmark
    John Long
    Gyorgy Buzsaki
    Description

    This dataset is composed of eight bilateral silicon-probe multi-cellular electrophysiological recordings performed on four male Long-Evans rats. These recordings were performed to assess the effect of novel spatial learning on hippocampal CA1 neural firing and LFP patterns in naïve animals. Each session consisted of a long (~4 hour) PRE rest/sleep epoch home-cage recordings performed in a familiar...

    Subject
    Neuroscience
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  • NYU Dataset

    Simultaneous recordings from 4 rats in the dorsal hippocampus and amygdala

    Alternate Title(s)
    TH-1
    Authors
    Adrien Peyrache
    Gyorgy Buzsaki
    Description

    The data set contains recordings made from multiple anterior thalamic nuclei, mainly the antero-dorsal (AD) nucleus, and subicular areas, mainly the post-subiculum (PoS), in freely moving mice. Thalamic and subicular electrodes yielding high number of the so-called Head-Direction (HD) cells were likely to be located in the AD nucleus and the PoS, respectively. Electrode placement was confirmed by histology....

    Subject
    Neuroscience
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  • NYU Dataset

    Multi-unit recordings from the rat hippocampus made during open field foraging

    Alternate Title(s)
    HC-2
    Authors
    Kenji Mizuseki
    Anton Sirota
    Eva Pastalkova
    Gyorgy Buzsaki
    Description

    The data set contains multichannel simultaneous recordings made from layer CA1 of the right dorsal hippocampus of three Long-Evans rats during open field tasks in which the animals chased randomly placed drops of water or pieces of Froot Loops while on an elevated square platform. In order to examine the temporal relationships between theta oscillations and the coordination of neuronal firing in the...

    Subject
    Neuroscience
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  • NYU Dataset

    Simultaneous electrophysiological recordings of ensembles of isolated neurons in rat medial prefrontal cortex and intermediate CA

    Alternate Title(s)
    PFC-2
    Authors
    Shigeyoshi Fujisawa
    Asohan Amarasingham
    Matthew T. Harrison
    Adrien Peyrache
    1 more author(s)...
    Description

    This dataset of multi single neuron recordings was acquired from three rats (EE, FF, GG) while they performed a working memory task. Neuronal activity was monitored simultaneously in the PFC (64 channels) and the intermediate CA1 (32 channels) of the hippocampus. In one rat (EE), sleep was also recorded before and after the task. The data was obtained during 52 main recording sessions and nine short...

    Subject
    Anatomy
    Neuroscience
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  • NYU Dataset

    Multi-unit spiking activity recorded from rat frontal cortex

    Alternate Title(s)
    FCX-1
    Authors
    Brendon O. Watson
    Daniel Levenstein
    J. Palmer Greene
    Jennifer N. Gelinas
    1 more author(s)...
    Description

    This data contains recordings from the rat frontal cortex (brain regions mPFC, OFC, ACC, and M2) during wake-sleep episodes where at least 7 minutes of wakefulness are followed by 20 minutes of sleep. The data was recorded using silicon probe electrodes in the frontal cortices of male Long Evans rats between 4-7 months of age during no specific behavior, task or stimulus. The animal was left alone...

    Subject
    Neuroscience
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  • NYU Dataset

    Neural recordings from the visual cortex and the prearcuate gyrus of macaque monkeys

    Authors
    Ori Maoz
    Gasper Tkacik
    Mohamad Saleh Esteki
    Roozbeh Kiani
    1 more author(s)...
    Description

    This data collection includes neural recordings obtained from the visual cortex (V1 and V2) and prearcurate gyrus (8Ar) of macaque monkeys (Macaca nemestrina and Macaca mulatta) during a direction discrimination task and code for replicating the modeling of neural representations. 96-channel microelectrode Utah arrays were implanted across the border of the V1 and V2 visual cortices of Macaca nemestrina....

    Subject
    Neuroscience
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  • NYU Dataset

    Intra-axonal Space Segmentation from 3D Scanning Electron Microscopy (SEM) of the Mouse Brain Genu of Corpus Callosum

    Authors
    Hong-Hsi Lee
    Dmitry S. Novikov
    Els Fieremans
    Description

    This dataset includes 3D scanning electron microscopy (SEM) images of a female mouse corpus callosum and MATLAB code for random walker (RaW) segmentations of myelinated axons. The code additionally characterizes inner axonal diameters and fiber orientation dispersion within segments of the intra-axonal spaces and myelin sheaths. In the study, a female 8-week-old C57BL/6 mouse was perfused trans-cardiacally...

    Subject
    Anatomy
    Neuroscience
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  • NYU Dataset

    Evaluation of Metronomic Chemotherapy Response Using Diffusion and Dynamic Contrast-enhanced MRI

    Alternate Title(s)
    Evaluation of Metronomic Chemotherapy Response Using dMRI and DCE MRI
    Authors
    Mehran Baboli
    Kerryanne V. Winters
    Melanie Freed
    Jin Zhang
    1 more author(s)...
    Description

    The dataset contains data collected from twelve Balb/c mice with metastatic breast cancer (4T1 mammary tumors). Six mice were in the control group and six mice were treated with 5-Fluorouracil (5FU) for metronomic chemotherapy for two weeks. Diffusion MRI (dMRI) and Dynamic Contrast-enhanced MRI (DCE-MRI) images were collected at baseline and post-treatment. Immunohistochemically (IHC) stains and measurements...

    Subject
    Cancer
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  • Modeling Bayesian inference with incomplete knowledge in monkeys presented with a direction discrimination task with post-decision wagering

    Authors
    Koosha Khalvati
    Roozbeh Kiani
    Rajesh P. N. Rao
    Description

    The investigators collected behavioral data from two macaque monkeys (M1 and M2) who were presented with a direction discrimination task with post-decision wagering. These monkeys received prior training to report the net direction of motion of a set of randomly moving dots. In each trial, the subject fixed their gaze on an initial fixation point, then red dots would appear on the periphery of the...

    Subject
    Neuroscience
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    Local Expert
    Roozbeh Kiani
  • NYU Dataset

    Switch-like and persistent memory formation in individual Drosophila larvae

    Authors
    Amanda Lesar
    Javan Tahir
    Jason Wolk
    Marc Gershow
    Description

    Using a Y-shaped maze, several experiments were developed to assess conditions of associative learning among fruit fly larvae. Prior to the start of the experiments, some fruit fly larvae were fed a diet of all-trans-retinal (ATR), which is a co-factor for csChrimson activation (eliciting escape behavior in flies which perceive red light). A subgroup of larvae who were fed ATR also received cycloheximide...

    Subject
    Neuroscience
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