NYU Dataset

Neural Cell Adhesion Molecule Required for Ventricular Conduction System Development

UID: 10649
* Corresponding Author
Description

The Purkinje cells (PCs) within the ventricular conduction system (VCS) has been widely investigated, because they are necessary for synchronous activation of the ventricular myocardium. This study identified genes that might influence PC development and VCS function. The differential transcriptional profiling revealed several highly enriched cell adhesion molecules in PCs. They uncovered two additional highly enriched immunoglobulin superfamily of cell adhesion molecules (IgSF-CAMs) in the VCS: activated leukocyte cell adhesion molecule (Alcam) and neural cell adhesion molecule 1 (Ncam-1). This dataset includes RNA sequencing data. The data provide insights into the complex developmental biology of the VCS.

Subject of Study
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Free to All
Instructions
RNA sequencing data have been deposited in Gene Expression Omnibus (GEO).
Access via GEO

RNA-seq data
Accession #: GSE172267

Associated Publications
Data Type
Equipment Used
Applied Biosystems StepOne
Gatan 3View
Gatan OnPoint BSE Detector
Illumina HiSeq 2500
Leica TCS SP5
LI-COR Odyssey Imaging System
On-chip Sort
VisualSonics Vevo 2100
Zeiss Gemini 300 FESEM
Zeiss M2BIO Dissecting Microscope
Software Used
Adobe Photoshop CC 2018
AxioVision 2012
bedGraphToBigWig v4
bedtools v2.17.0
CRISPOR
DAVID
DESeq2 v3.0
DigitalMicrograph v3.31
Dragonfly v4.1
GTF vGRCm38.74
HTSeq v0.6.0
Image Studio Lite
ImageJ
LabChart 7 Pro v7.3.1
LAS AF
MATLAB
Picard v1.126
R v3.1.1
STAR v2.5.0c
Vevo LAB v1.5.0
Grant Support