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  • NYU Dataset

    Mass Spectrometry Data Suggests Mitovesicles are Altered in Down Syndrome

    Authors
    Pasquale D'Acunzo
    Rocio Perez-Gonzalez
    Yohan Kim
    Tal Hargash
    11 more author(s)...
    Description

    This dataset showed that mitovesicles, extracellular vesicles (EVs) of mitochondrial origin, are altered in Down syndrome (DS). Mitochondrial dysfunction is a distinctive feature of aging and neurodegenerative disorders, such as DS and Alzheimer’s disease. For this study, a high-resolution density gradient separation of EVs isolated from murine and human DS and diploid control brains was used. Using...

    Subject
    Proteomics
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    Free to All
  • NYU Dataset

    RNA Immunoprecipitation Sequencing Reveals ORF1p Association with Prostate Cancer

    Authors
    Erica M. Briggs
    Wilson McKerrow
    Paolo Mita
    Jef D. Boeke
    2 more author(s)...
    Description

    Long interspersed element-1 (LINE-1) is an autonomous retroelement that utilizes copy and paste mechanism to propagate themselves throughout the genome through a process called retrotransposition. The LINE-1 bicistronic mRNA codes for two proteins, ORF1p and ORF2. While LINE-1 transcription is usually repressed in most healthy somatic cells, ORF1p expression has been observed in tumors, including prostate...

    Subject
    Cancer
    Genomics
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    Free to All
  • NYU Dataset

    Oxidative Phosphorylation Is Dysregulated Within the Basocortical Circuit in Mouse Model of Down Syndrome and Alzheimer’s Disease

    Authors
    Melissa J. Alldred
    Sang Han Lee
    Grace E. Stutzmann
    Stephen D. Ginsberg
    Description

    Neurological dysfunction associated with Down syndrome (DS) is the concomitant basal forebrain cholinergic neuron (BFCN) degeneration and onset of Alzheimer’s disease (AD) pathology. Previously, single population RNA sequencing analysis in the Ts65Dn (Ts) mouse model of DS revealed that the mitochondrial oxidative phosphorylation pathway was significantly impacted, where a large subset of genes within...

    Subject
    Neuroscience
    Proteomics
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    Author Approval Required
  • NYU Dataset

    Condensed Mitochondria Assemble Into the Acrosomal Matrix During Spermiogenesis

    Authors
    Mindong Ren
    Yang Xu
    Colin K. L. Phoon
    Hediye Erdjument-Bromage
    4 more author(s)...
    Description

    This study used proteomic analysis, respirometry, and electron microscopy to examine the development of condensed mitochondria. The dataset contains proteomic and imaging data. The data indicate that condensed mitochondria formed from orthodox mitochondria during meiosis in order to support the formation of the acrosomal matrix. Condensed mitochondria also respired more actively and contained more...

    Subject
    Proteomics
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    Free to All
  • NYU Dataset

    Chronic Stress Primes Innate Immune Responses in Mice and Humans

    Authors
    Tessa J. Barrett
    Emma M. Corr
    Coen van Solingen
    Florencia Schlamp
    18 more author(s)...
    Description

    Psychological stress is linked with systemic inflammation. It accelerates inflammatory disease progression and monocytes are key in sustaining systemic inflammation. However, the mechanisms underlying stress-mediated inflammation and future health risk remains unknown. This study examined the impact of psychological stress on monocytes and showed that psychological stress induces remodeling of the...

    Subject
    Genomics
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    Free to All
  • NYU Dataset

    Proper Mitochondrial Translation Initiation and Maintenance of Formylmethionyl tRNAs Requires SHMT2

    Authors
    Denise R. Minton
    Minwoo Nam
    Daniel J. McLaughlin
    Jong Shin
    7 more author(s)...
    Description

    Eukaryotic cells upregulate oxidative metabolism to maintain homeostasis upon glucose restriction. This study used CRISPR/Cas9-based screening to identify serine catabolic enzyme SHMT2. They found that the mitochondrial SHMT2 is required for robust mitochondrial oxygen consumption and low glucose proliferation. This dataset contains immunoblot images, as well as supplementary data tied to the publication....

    Subject
    Genomics
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    Free to All
  • NYU Dataset

    Fluoride Exposure Alters Calcium Signaling and Mitochondrial Function in Enamel Cells

    Authors
    Francisco J. Aulestia
    Johnny Groeling
    Guilherme H. Souza Bomfim
    Veronica Costiniti
    8 more author(s)...
    Description

    Fluoride is a naturally occurring mineral that helps build strong teeth and prevent cavities. However, excessive fluoride intake causes dental fluorosis, which are enamel defects that can increase the risk of tooth decay. This study examined the effects of fluoride exposure in enamel cells to assess its impact on calcium signaling. For their investigation, they isolated primary EO cells from Sprague...

    Subject
    Genomics
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    Free to All
  • NYU Dataset

    3D Reconstructions of Parasite Development and the Intracellular Niche of Encephalitozoon intestinalis

    Authors
    Noelle V. Antao
    Cherry Lam
    Ari Davydov
    Margot Riggi
    6 more author(s)...
    Description

    Microsporidia are obligate intracellular pathogens that infect a wide range of invertebrate and vertebrate hosts, including humans. In humans, microsporidia most often infect the gastrointestinal tract and cause diarrheal diseases, but in immunocompromised patients, infections can be fatal. Previous knowledge of microsporidian intracellular development was based on 2D transmission electron microscopy...

    Subject
    Infectious Disease
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    Free to All