Description

This dataset showed that mitovesicles, extracellular vesicles (EVs) of mitochondrial origin, are altered in Down syndrome (DS). Mitochondrial dysfunction is a distinctive feature of aging and neurodegenerative disorders, such as DS and Alzheimer’s disease. For this study, a high-resolution density gradient separation of EVs isolated from murine and human DS and diploid control brains was used. Using this method, they identified and characterized previously unknown population of double-membraned EVs. The double-membraned EVs contained multiple mitochondrial proteins different from formerly described EV subtypes, including microvesicles and exosomes.

The dataset contains mass spectrometry data. The publication also has supplementary data that includes several tables. The tables contain data about density range of the fractions obtained by the OptiPrep step-gradient used to separate brain EVs, mitochondrial proteins found in fraction 8 and clustered by function, proteins present only in 2N mice EVs, proteins that are more abundant in 2N mice than in Ts2 mice EVs, proteins present only in Ts2 mice EVs, and proteins that are more abundant in Ts2 mice than in 2N mice EVs. The tables also contain data about gene ontology analysis of the top 50 differentially expressed pathways in Ts2 mice EVs compared to diploid littermates and specification of the human subjects whose frozen Broadmann area 9 (BA9) samples were used for EV isolation.

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The mass spectrometry data for this study are available at MassIVE and supplementary data associated with this article is available on PubMed Central (PMC) under Supplementary Materials.
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Mass spectrometry data
Accession #: MSV000085447

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Supplementary data
Accession #: PMC7880603

Associated Publications
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Equipment Used
Agilent 2100 Bioanalyzer
Gel Logic
iBright FL1500 Imaging System
Molecular Devices SpectraMax
Thermo Scientific Q Exactive HF
Thermo Scientific Talos L120C
VersaMax Microplate Reader
ZetaView PMX-120
ZetaView PMX-220
Software Used
Andromeda
fgsea
GraphPad Prism v6.01
ImageJ
MaxQuant v1.6.0.1
Multi Gauge v2.0
Grant Support