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Framingham Heart Study
- Alternate Title(s)
- FHS
- Authors
- Vasan S. RamachandranEmelia J. BenjaminL. Adrienne CupplesR. Curtis Ellison7 more author(s)...
- Description
The Framingham Heart Study (FHS) is an ongoing cohort study dedicated to identifying common factors or characteristics that contribute to cardiovascular disease (CVD). It is a collaborative project of the National Heart, Lung and Blood Institute and Boston University. In 1948, an original cohort of 5,209 men and women between 30 and 62 years old were recruited from Framingham, MA. An Offspring Cohort...
- Subject
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Chronic DiseaseGenomicsHealth StatusPopulation CharacteristicsRisk Factors
- Access Rights
- Fee RequiredApplication Required
- Local Expert
- Jaime Ramos-CejudoNiyati Parekh
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NYU Dataset
Genomic data for the testing of gold-standard networks of direct regulatory interactions in Saccharomyces cerevisiae
- Authors
- Sisi MaAlexander Statnikov
- Description
This data was created and compiled as researchers built genome-scale gold-standard networks of direct regulatory interactions in Saccharomyces cerevisiae that incorporate binding and gene knockout data. The research team used seven performance measurements to see the accuracy of eighteen statistics association-based approaches for de-novo network reverse-engineered in 13 different datasets spanning...
- Subject
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Genomics
- Access Rights
- Free to All
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NYU Dataset
SARS-CoV-2 Sequences from the NYU Langone Health COVID-19 Inpatient and Outpatient Population
- Authors
- Matthew T. MauranoSitharam RamaswamiPaul ZappileDacia Dimartino41 more author(s)...
- Description
The dataset includes 864 genomic sequences obtained from COVID-19 patients aged 18 years old and above within the NYU Langone Health system between March 12 and May 10, 2020. Patients reflected the health system's catchment area (i.e., the greater New York City metropolitan area). rRNA-depleted total RNA was sequenced, underwent quality control, and analyzed to produce phylogenetic trees. Further...
- Subject
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COVID-19GenomicsInfectious DiseaseRisk Factors
- Timeframe
- 2020
- Access Rights
- Free to AllApplication Required
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All of Us Research Hub
- Description
With an emphasis on reaching historically underrepresented populations, the All of Us Research Program recruits adults aged 18 and above across the United States to share their health data to enable new insights into human health and research on precision medicine. Participants contribute electronic health records (EHR), survey responses, biospecimens, wearable devices (biometrics), and physical measurements....
- Subject
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COVID-19Electronic Health RecordsGenomicsHealth Care SystemHealth StatusMental HealthPopulation CharacteristicsRisk Factors
- Access Rights
- Application RequiredAll NYU
- Local Expert
- Fred LaPolla
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NYU Dataset
Dataset and Code to Model Dispersal Dynamics of SARS-CoV-2 Lineages During the First Epidemic Wave in New York City
- Authors
- Simon DellicourSamuel L. HongBram VranckenAntoine Chaillon9 more author(s)...
- Description
To construct a fixed time-scaled phylogenetic tree, the investigators combined 828 viral genome sequences obtained from COVID-19 patients at NYU Langone Health between March and May 2020 with 1,899 background sequences that were contributed to the Nextstrain repository. A total of 2,727 SARS-CoV-2 genomic sequences are available in the dataset. The supporting R code included with the dataset will produce...
- Subject
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COVID-19GenomicsInfectious Disease
- Timeframe
- 2020
- Access Rights
- Free to All
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NYU Dataset
Transposon Insertion Profiling by Sequencing (TIPseq) Utilized for LINE-1 Mapping in Single Cells
- Authors
- Wilson McKerrowZuojian TangJared P. SterankaLindsay M. Payer5 more author(s)...
- Description
This dataset was compiled to determine a genome-wide long interspersed element-1 (LINE-1) insertion site mapping method for bulk DNA. This study has shown that transposon insertion profiling by sequencing (TIPseq) is a method that can be used for LINE-1 mapping in single cells. For the study, live GM12878 lymphoblastoid cells were obtained from Coriell Institute for Medical Research. The dataset contains...
- Subject
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Genomics
- Access Rights
- Free to All
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Alzheimer’s Disease Neuroimaging Initiative
- Alternate Title(s)
- ADNI, ADNI1, ADNI GO, ADNI2, ADNI3
- Authors
- Michael W. Weiner
- Description
The Alzheimer’s Disease Neuroimaging Initiative (ADNI) began in 2004 as longitudinal multicenter study to identify clinical, imaging, genetic, and biochemical biomarkers for the detection and tracking of Alzheimer’s disease (AD). Participants are recruited from and followed at 59 research sites in the United States and Canada. ADNI1 enrolled 400 subjects who were diagnosed with mild cognitive impairment...
- Subject
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Chronic DiseaseGenomicsMental HealthNeuroscience
- Access Rights
- Free to AllApplication RequiredAuthor Approval Required
- Local Expert
- Omonigho M. BubuRicardo Osorio
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National Alzheimer’s Coordinating Center Data
- Alternate Title(s)
- NACC
- Description
The National Alzheimer’s Coordinating Center (NACC) was created in 1999 to facilitate research with data collected from Alzheimer's Disease Research Centers (ADRCs) across the United States. NACC oversees data collection and sharing for a number of datasets. The Uniform Data Set (UDS) contains longitudinal and standardized data collected from ADRCs since 2005. ADRC enrollment protocols vary and...
- Subject
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Chronic DiseaseMental HealthNeuroscience
- Access Rights
- Free to AllApplication RequiredAuthor Approval Required
- Local Expert
- Omonigho M. BubuRicardo Osorio
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ENIGMA Consortium
- Alternate Title(s)
- Enhancing Neuro Imaging Genetics through Meta-Analysis Consortium
- Description
The Enhancing Neuroimaging Genetics through Meta-Analysis (ENIGMA) Consortium is a global project originating from University of Southern California which unites researchers across the fields of imaging genomics, neurology, and psychiatry to understand brain structure and function. ENIGMA consists of 50 active working groups which are organized into four major research cores: Genomics, Disease, Protocol...
- Subject
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GenomicsMental HealthNeuroscience
- Access Rights
- Application Required
- Local Expert
- Yuliya Yoncheva
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NYU Dataset
Clinical and genomic signatures of rising SARS-CoV-2 Delta breakthrough infections in New York
- Authors
- Ralf DuerrDacia DimartinoChristian MarierPaul Zappile10 more author(s)...
- Description
Investigators obtained high quality SARS-CoV-2 sequences from 132 vaccinated and 283 unvaccinated individuals who were seen at NYU Langone Health facilities between May 1, 2021 and August 3, 2021. Fully vaccinated individuals received either two doses of the BNT162b2 (Pfizer/BioNTech) or mRNA-1273 (Moderna) vaccines, or a single-dose of the COVID-19 Janssen vaccine. Breakthrough infections were defined...
- Subject
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COVID-19GenomicsInfectious Disease
- Timeframe
- 2021
- Access Rights
- Free to AllApplication Required