NYU Dataset

Early-Life Antibiotic Exposure Alters Intestinal Microbiome Composition

UID: 10627
* Corresponding Author
Description

Early-life antibiotic exposures during postnatal development have lasting effects on microbiota composition. Previous studies in humans and mice have found altered microbial composition to be associated with enhanced disease susceptibility and modified immune status. They investigated impact of timing of antibiotic exposure by treating 5 to 9 days C57BL/6J mice with two of the most commonly prescribed medications, amoxicillin or azithromycin, in children. The dataset contains 16S rRNA sequencing data. This study showed that constituents of the early-life microbiota composition are critical to intestinal immune maturation.

Subject of Study
Subject Domain
Keywords

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Restrictions
Free to All
Instructions
16S rRNA sequencing data are available in Qiita. Qiita is an entirely open-source microbial study management platform. Users need to create an account with Qiita to access any studies and files available.
Access via Qiita

16S rRNA sequencing data
Accession #: 14759

Associated Publications
Data Type
Equipment Used
BD LSR II
BD LSRFortessa
Illumina MiSeq System
Qubit Fluorometer
Software Used
ComplexHeatmap v2.6.2
DADA2 v0.99.8
DESeq2 v1.30.1
FlowJo v10.8.1
ggplot2
Graphpad Prism v9.5.1
MAFFT v7
phyloseq
QIIME2 v2022.2.1
vegan v2.5-7
Grant Support
Sergei S. Zlinkoff Fund/Sergei S. Zlinkoff Fund
Transatlantic Network of Excellence/Leducq Fondation
Emch Foundation/Emch Foundation
Bernard Levine Postdoctoral Fellowship in Immunology/NYU Grossman School of Medicine
BSCGIO 462 157841/1/Swiss National Science Foundation