NYU Dataset

NOGOB Receptor Deficiency Increases Cerebrovascular Permeability and Hemorrhage

UID: 10611
* Corresponding Author
Description

Cerebral cavernous malformation (CCM) lesions are caused by loss of function of CCM genes. Previous study showed that NOGOB receptor (NGBR) knockout in endothelial cells results in cerebrovascular lesions in the mouse embryo. However, the molecular mechanism by which NGBR regulates CCM1/2 expression has not been explained. This study used RNA sequencing analysis to determine the alteration of transcriptomic profiling in human brain microvascular endothelial cells (HBMVECs). For the study, NGBR was knocked down with NGBR small interfering RNA in HBMVECs in vitro. The dataset contains sequencing data. These findings indicate that NGBR-mediated histone acetylation is a potential target for preventing the onset and progression of sporadic CCM.

Subject of Study
Subject Domain
Keywords

Access

Restrictions
Free to All
Instructions
The sequencing data are deposited in the NCBI’s Gene Expression Omnibus (GEO) database.
Access via GEO


Accession #: GSE198351

Associated Publications
Data Type
Equipment Used
Agilent Fragment Analyzer System
Illumina HiSeq 2000
PerkinElmer Microplate Reader
Reichert-Jung Ultracut Microtome
Zeiss EM900
Software Used
edgeR
GO Enrichment Analysis
GraphPad Prism
IBM SPSS
ImageJ
MAP-Rseq
MSigDB v7.3
ToppGene
Grant Support
GRNT33671180/American Heart Association