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  • NYU Dataset

    Limited Environmental Serine and Glycine Confer Brain Metastasis Sensitivity to PHGDH Inhibition

    Authors
    Bryan Ngo
    Eugenie Kim
    Victoria Osorio-Vasquez
    Sophia Doll
    36 more author(s)...
    Description

    Brain metastasis is the most common intracranial malignancy in adults, which is often fatal. Studies have shown that brain metastases depend on cooperative cellular interactions between tumor cells and specialized cells within the central nervous system (CNS). Metabolic constraints imposed by the serine and glycine limited brain environment restrict metastatic tumor growth. This study showed that 3-phosphoglycerate...

    Subject
    Neuroscience
    Proteomics
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    Author Approval Required
  • NYU Dataset

    Proper Mitochondrial Translation Initiation and Maintenance of Formylmethionyl tRNAs Requires SHMT2

    Authors
    Denise R. Minton
    Minwoo Nam
    Daniel J. McLaughlin
    Jong Shin
    7 more author(s)...
    Description

    Eukaryotic cells upregulate oxidative metabolism to maintain homeostasis upon glucose restriction. This study used CRISPR/Cas9-based screening to identify serine catabolic enzyme SHMT2. They found that the mitochondrial SHMT2 is required for robust mitochondrial oxygen consumption and low glucose proliferation. This dataset contains immunoblot images, as well as supplementary data tied to the publication....

    Subject
    Genomics
    Access Rights
    Free to All
  • NYU Dataset

    Comprehensive Analysis of Regenerative and Transformed Liver

    Authors
    Daniel J. McLaughlin
    Hannan Mir
    Minwoo Nam
    Richard Possemato
    Description

    This study performed a differential transcriptomic and metabolomic analysis of benign proliferative and transformed liver. They used partial hepatectomy-induced liver regeneration and diethylnitrosamine (DEN) induced carcinogenesis to identify and analyze alterations specific to multiple regenerative and transformed tissue states. This dataset contains supplementary data tied to the publication. The...

    Subject
    Genomics
    Access Rights
    Free to All
  • NYU Dataset

    Identification of PIM1 Substrates Reveals a Role for NDRG1 Phosphorylation in Prostate Cancer

    Authors
    Russell J. Ledet
    Sophie E. Ruff
    Yu Wang
    Shruti Nayak
    4 more author(s)...
    Description

    This study performed a chemical genetic screen to identify PIM1 substrates in prostate cancer cells. They identified 25 previously unknown PIM1 substrates and their phosphorylation sites. Among the identified PIM1 substrates, N-Myc Downstream-Regulated Gene 1 (NDRG1) was shown to be as an inhibitor of metastasis. The study demonstrated that PIM1 phosphorylation of NDRG1 reduced its stability, nuclear...

    Subject
    Cancer
    Proteomics
    Access Rights
    Free to All