NYUMets

Description

NYUMets is a repository of imaging and clinical data contributed by patients participating in the Center for Advanced Radiosurgery clinical registry with stage IV (metastatic) brain cancer. The first data release, NYUMets_Brain v1.0, contains over 20,000 de-identified and anonymized image sequences from 8,003 MRI studies and associated clinical data collected from 1,429 patients. Each patient contributed an average of 6 imaging studies over an average time of 17 months. The dataset includes:

Expert segmentations: 2367
T1 pre contrast: 5,542
T1 post contrast: 7,245
High-res T1 post contrast: 1,462
High-res T2: 6,920
FLAIR: 5,322
4860 timepoints of clinical follow-up
81,562 medication updates

Subject of Study

Subject Domain

Keywords

Magnetic Resonance Imaging

Metastasis

Neuroimaging

Neurosciences

Access

Restrictions

Application Required

Author Approval Required

Instructions

Please complete the Data Request Form to request access to this dataset. The information included in the form will be sent to the corresponding author who will evaluate your request for their data. The corresponding author may ask you to provide additional information if necessary.

An Amazon Web Services (AWS) account is required to access the data. Please include your Amazon Resource Name (ARN) in the Study Description section of the Data Request Form.

Please note that the data are available for non-commercial purposes only.

Access via Data Request Form

Form to request access

Associated Publications

Oermann E, Link K, Schnurman Z, Liu C, Kwon YJ, Jiang LY, Nasir-Moin M, Neifert S, Alzate J, Bernstein K, Qu T, Chen V, Yang E, Golfinos J, Orringer D, Kondziolka D. Longitudinal deep neural networks for assessing metastatic brain cancer on a massive open benchmark. Research Square [Preprint]. 2023 Jan 11.

Link KE, Schnurman Z, Liu C, Kwon YJF, Jiang LY, Nasir-Moin M, Neifert S, Alzate JD, Bernstein K, Qu T, Chen V, Yang E, Golfinos JG, Orringer D, Kondziolka D, Oermann EK. Longitudinal deep neural networks for assessing metastatic brain cancer on a large open benchmark. Nat Commun. 2024 Sep 17;15(1):8170. doi: 10.1038/s41467-024-52414-2.

Data Type

Clinical Measures

Imaging

Study Type

Observational

Dataset Format(s)

CSV, NIFTI

Other Resources: API and Data Structure

NYUMets on AWS

NYUMets

Alternate Titles(s): NYUMets_Brain v1.0

Access