NYU Dataset

Transformation of Primary Sensory Cortical Representations From Layer 4 to Layer 2

Part of: Peron Lab |
UID: 10576
* Corresponding Author
Description

Sensory input arrives from thalamus in cortical layer (L) 4 and L4 to L2 constitutes one of the earliest cortical feedforward networks. However, the transformation performed by this network remains unknown. This study used two-photon calcium imaging to record neural activity in L2 to L4 of primary vibrissal somatosensory cortex (vS1) as mice perform an object localization task with two whiskers. To study how neural representations change from L4 to L2, they trained transgenic mice, Ai162 x Slc17a7-Cre, expressing GCaMP6s in cortical excitatory neurons and implanted with a cranial window over vS1 on a two-whisker object localization task. This dataset contains source data for underlying figures, which includes data for volumetric calcium imaging during a two-whisker task, classification of touch-sensitive neurons, laminar distribution of different touch cell types, transition to sparser but more reliable responses from L4 to L2, decoding of touch features by neuron type and layer, pairwise correlations across layers and neuron types, and ensembles and their role in touch responses.

Subject of Study
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Access

Restrictions
Free to All
Instructions
The source data are provided with this paper on PubMed Central (PMC) and code used to analyze the data and generate the figures is available on GitHub.
Associated Publications
Data Type
Equipment Used
Advanced Illumination SL162
Basler acA800-510um
Nikon Multiphoton Microscope
Software Used
Janelia Whisker Tracker
MATLAB R2019a
ScanImage v2017
Dataset Format(s)
MATLAB
Grant Support
Whitehall Foundation/Whitehall Foundation