Project Tycho includes data from all weekly notifiable disease reports for the United States and elsewhere dating back to 1888. It includes data counts for 58 diseases and 92 conditions; the availability of data varies by condition and location. Data are available as pre-compiled datasets, through a data query system, and through an API. Pre-compiled datasets include 92 datasets on specific diseases...

This ongoing prospective cohort study examines a wide range of individual, social and structural factors as predictors of risk and resilience for behavioral outcomes (e.g., substance use and sexual activity), mental health conditions (e.g., depression, anxiety) and biological outcomes (e.g., HIV seroconversion, viral and bacterial sexually transmitted infections) in a sample of emerging adult men based...

The Demographic and Health Surveys (DHS) Program overseen by the US Agency for International AID (USAID) uses nationally representative surveys, biomarker testing, and geographic location to collect data on monitoring and impact evaluation indicators for individual countries and for cross-country comparisons. Standardized DHS surveys include the Demographic and Health Survey, Service Provision Assessment,...

The dataset includes 864 genomic sequences obtained from COVID-19 patients aged 18 years old and above within the NYU Langone Health system between March 12 and May 10, 2020. Patients reflected the health system's catchment area (i.e., the greater New York City metropolitan area). rRNA-depleted total RNA was sequenced, underwent quality control, and analyzed to produce phylogenetic trees. Further...

From 2020 through 2021, the Assessment Capacities Project (ACAPS) Government Measures dataset tracked government responses to the pandemic over time using information compiled by ACAPS analysts and volunteers from the University of Copenhagen and University of Lund. Information was obtained from public sources, including governments, media, United Nations agencies, and other organizations, and are...

A collaborative effort between Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE), Johns Hopkins University Applied Physics Lab (JHU APL), and ESRI Living Atlas Team, the repository contains data on confirmed COVID-19 cases, deaths, recoveries, and tests at the national and state/province province level from January 22, 2020 to March 10, 2023. Throughout the lifetime of...

The MIDAS (Models of Infectious Disease Agent Study) Online Portal for COVID-19 Modeling Research is a collection of publicly-available COVID-19 resources to support dashboard monitoring, data processing, modeling, and visualization efforts. Collections listed in the portal include case counts and case line lists with documented metadata, peer-reviewed and non-peer-reviewed parameter estimates, and...

The global dataset includes aggregated and anonymized daily mobility trends using data from users who turned on Google's Location History setting from February 2020 through October 2022. Mobility data is reported on a national level and for smaller administrative regions (e.g. states, provinces) where available. Locations are grouped into 6 categories: retail and recreation, grocery and pharmacy, parks,...

The COVID Tracking Project provided national, state, and territory-level data on COVID-19 testing (PCR and antibody, and antigen tests), hospitalization (ever hospitalized, currently hospitalized, ventilator use, ICU admission, and total hospitalizations), and outcomes (all deaths, confirmed deaths, probable deaths, new deaths, and recoveries) within the United States and its territories. Data collection...

The Centers for Disease Control and Prevention (CDC) has released deidentified line-listed datasets based on COVID-19 cases reported to CDC. Data suppression is performed on low frequency records (