NYU Dataset

Data from Mucosal Immune Profiling in Patients with Inflammatory Bowel Disease

UID: 10440
Description

This study dataset contains data from 28 adult and pediatric patients who were recruited from NYU Langone's Inflammatory Bowel Disease (IBD) Center. Study inclusion and exclusion criteria are noted below.

Inclusion criteria:

  • Subjects must have a suspected diagnosis of ulcerative colitis or Crohn’s disease
  • Controls must have no clinical suspicion of ulcerative colitis or Crohn’s disease
  • Signed and dated informed consent/assent forms and document(s) indicating that the adult subject and/or the parent or legal guardian of pediatric subjects were informed of all pertinent aspects of the study.
  • Ability to be compliant and complete the study protocol.
Exclusion criteria:
  • Pregnant patients, patients with impaired cognition, and prisoners
  • Subjects who are receiving systemic anticoagulation (e.g. heparin or warfarin)

The following assessments were completed:

  • Demographics and medical history: date of birth, body mass index (BMI), smoking status, gender, ethnicity, race, health insurance, age of IBD diagnosis, presence of extra-intestinal manifestations, family history of IBD, hospitalization for flares
  • Medication history: aminosalicylate (5-ASA), steroids, mercaptopurine (6-MP)/azathioprine/methotrexate/ anti-tumor necrosis factor (anti-TNF), vedolizumab, ustekinumab, tofacitinib, antibiotics
  • Other medical history: History of enteric infection, personal history of autoimmunity, family history of other autoimmunity, history of cancer list of non-IBD medications
  • Clinical scores: Partial Mayo Score, Endoscopic Mayo Score, Charlson Comorbidity index
  • Recent labs ( +/- 4 weeks): Albumin, C-reactive protein (CRP), erythrocyte sedimentation rate (ESR), hemoglobin, stool calprotectin
  • IBD surgical history: number of IBD surgeries, type of surgeries and date of surgeries
  • Biospecimen collection: blood (for serum and DNA extraction), tissue, stool, biopsy
Geographic Coverage
New York (State) - New York City
Subject of Study
Subject Domain
Population Age
Adolescent (13 years - 18 years)
Adult (19 years - 64 years)
Keywords

Access

Restrictions
Application Required
Author Approval Required
Instructions
Please complete the Data Request Form to request access to this dataset. The information included in the form will be sent to the Corresponding Author who will evaluate your request for their data. The Corresponding Author may ask you to provide additional information if necessary. Questions about the dataset may be directed to Gigi Ghiasian, Research Program Manager, at Ghoncheh.Ghiasian@nyulangone.org.
Associated Publications
Data Type
Study Type
Observational
Data Collection Instruments
Charlson Comorbidity Index
Grant Support
HHMI Faculty Scholars/Howard Hughes Medical Institute