NYU Dataset

Energetics of the Microsporidian Polar Tube Invasion Machinery

UID: 10715
* Corresponding Author
Description

Microsporidia are obligate intracellular parasites that use an unusual invasion organelle called the polar tube (PT), which is ejected from a dormant spore at ultra-fast speeds, to infect host cells. This study used serial block-face scanning electron microscopy (SBF-SEM) to capture 3-dimensional snapshots of Anncaliia algerae spores in different states of the PT ejection process. They proposed a theoretical framework starting with a systematic exploration of possible topological connectivity amongst organelles and assessed the energy requirements of the resulting models by performing PT firing experiments in media of varying viscosity and using the results to rank the proposed hypotheses based on their predicted energy requirement. This dataset contains SBF-SEM and live-cell imaging data.

Subject of Study
Subject Domain
Keywords

Access

Restrictions
Free to All
Instructions
SBF-SEM data is available in EMPIAR and live-cell imaging data of methylcellulose germination experiments have been deposited in Zenodo. The code used in this study, including the analysis of rheometer data, and the calculation of pressure, power and total energy for each hypothesis, is available on GitHub.
Access via EMPIAR

SBF-SEM data
Accession #: EMPIAR-11367

Access via EMPIAR

SBF-SEM data
Accession #: EMPIAR-11368

Access via Zenodo

Live-cell imaging data

Associated Publications
Data Type
Equipment Used
Gatan 3View
Gatan OnPoint BSE Detector
Zeiss Axio Observer
Zeiss Gemini 300 VP FESEM
Software Used
DigitalMicrograph v3.31
Dragonfly v4.1
Fiji
Grant Support
AHA Postdoctoral Fellowship/American Heart Association
Irma T. Hirschl Career Scientist Award/Irma T. Hirschl and Monique Weill-Caulier Trust
NYU Dean’s Undergraduate Research Fund/NYU College of Arts & Science
SSP-2018-2737/Searle Scholars Program
PEW-00033055/Pew Charitable Trusts
Stanford Bio-X Graduate Fellowship/Stanford University
Ministry of Education of the People's Republic of China/Ministry of Education of the People's Republic of China
CZ Biohub Investigator Program/Chan Zuckerberg Biohub Network
Schmidt Innovation Grant/Schmidt Futures
Moore Foundation Research Grant/Gordon and Betty Moore Foundation
HHMI Faculty Fellowship/Howard Hughes Medical Institute