NYU Dataset

PrimSeq: A Deep Learning-based Pipeline to Quantitate Rehabilitation Training

UID: 10595
* Corresponding Author
Description

To develop the Primitive Sequencing pipeline (PrimSeq), a deep learning-based framework to automatically identify and count functional primitives in rehabilitation training, investigators captured the upper body motion of 41 chronic stroke patients aged 21 to 84 years old who performed a battery of rehabilitation activities. Eligibility criteria included premorbid right-handedness, ability to give informed consent, and unilateral motor stroke with contralateral upper extremity weakness scoring <5/5 in any major muscle group. Patients were excluded if they had hemorrhagic stroke with mass effect, or subarachnoid or intraventricular hemorrhage; traumatic brain injury; a musculoskeletal, major medical, or non-stroke neurological condition that interferes with motor function; contracture at shoulder, elbow, or wrist; moderate UE dysmetria or truncal ataxia; apraxia; visuospatial neglect; global inattention; or legal blindness. Upper extremity impairment level was measured using the Fugl-Meyer Assessment (UE-FMA). The functional primitives explored in this project were reach, reposition, transport, stabilize, and idle motions.

The dataset includes biomechanical data captured by 9 inertial measurement units (IMU) affixed to each stroke patient's upper body, video capture from 2 orthogonal cameras, patient demographic and clinical information, as well as IMU data from healthy controls.

Geographic Coverage
New York (State) - New York City
Subject of Study
Subject Domain
Population Age
Adult (19 years - 64 years)
Senior (65 years - 79 years)
Aged (80 years and over)
Keywords

Access

Restrictions
Free to All
Instructions
Data and code supporting this project has been shared in the SimTK and Github repositories, respectively. In order to access the data deposited in SimTK, interested researchers must create and log in with a free SimTK account.
Access via SimTK

Clinical, kinematic, and video data

Associated Publications
Data Type
Equipment Used
Noraxon Ninox
Noraxon Ultium Motion
Software Used
myoMOTION
Study Type
Observational
Data Collection Instruments
Fugl-Meyer Assessment (UE-FMA)
Grant Support
19AMTG35210398/American Heart Association/Amazon Web Service
1922658/NSF
Other Resources
Github

Python code