NYU Dataset
Structure Prediction Modeling Characterized Guided Entry of Tail-Anchored Proteins 3 in Mycobacterium tuberculosis
Part of: Heran Darwin Lab |
UID: 10493
- Description
This study investigated the pathways important for Mycobacterium tuberculosis (M. tuberculosis) pathogenesis. M. tuberculosis genome was searched for open reading frames and an operon, Rv3679-Rv3680, was identified. Using structure prediction modeling, they found that Rv3679 and Rv3680 have some structural similarity to the guided entry of tail-anchored proteins 3, which delivers proteins into the membranes of the endoplasmic reticulum. The dataset contains coordinate and structure factor of ADP, ATPγS, and AMP-PNP. In addition, the publication includes supplementary data, which contains quantitative mass spectrometry data comparing proteins in total lysates of wild type, bagAB, and complemented M. tuberculosis strains.
Mycobacterium tuberculosis / H37Rv
Mycobacterium tuberculosis / MHD1428
Mycobacterium tuberculosis / MHD1385
Mycobacterium tuberculosis / MHD1431
Mycobacterium tuberculosis / MHD1432
Escherichia coli / DH5α
Associated Publications
Data Type
Equipment Used
Software Used
Access
- Restrictions
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Free to All
- Instructions
- The coordinate and structure factor files of ADP, ATPγS, and AMP-PNP are deposited in Protein Data Bank (PDB). All other relevant data are available on PubMed Central (PMC) under Supplementary Materials.
BioSpec Mini Bead Beater
SpeedVac
- Grant Support
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